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Lung cancers involve many different genetic mutations

5:39 PM, October 22, 2008

Twenty-six different genes are frequently mutated in the most common form of lung cancer, lung adenocarcinoma, according to a study published in the journal Nature. That more than doubles in one swoop the number of genes known to be implicated in this cancer.

We're not talking about genes that were mutated from birth in individuals -- rather, genetic mistakes that accumulated in lung tissue throughout individuals' lifetimes. To track these genes down, the researchers (who are members of the Tumor Sequencing Project, which is a consortium of scientists from several universities) compared samples of lung cancer tissue to non-cancerous tissue donated by 188 patients with lung adenocarcinoma, screening for genetic mistakes in 623 genes that were already known to be linked to other types of cancers.

Among the 26 genes they found were Retinoblastoma 1, linked to a childhood eye cancer; Neurofibromatosis 1, linked to a rare genetic disorder of uncontrolled nerve tissue; another with a mouthful of a name -- Ataxia Telengiectasia Mutated -- linked to some leukemias and lymphoma as well as a rare neurological childhood disorder.

The findings should be medically useful, researchers say, because the 26 genes are known to be involved in a variety of biological pathways through which cells get their housekeeping done. Sometimes, in cancers, these pathways get turned on when they should be off, or ramped up too high, or too low. If scientists know that a pathway's gone awry in a cancer cell, they can use a drug to interfere with that pathway -- and by so doing, maybe block the growth of a tumor.

The researchers found, for example, that two-thirds of the tumors had an altered "MAPK" pathway -- and there are drugs already known to act against that pathway, called MEK inhibitors. Thus they may prove promising in lung cancer treatment. (MEK inhibitors have been tested with some success in mice with colon cancer, though we all know to be wary about making too much of mouse cures.)

The researchers also found key differences between cancers in people with significant histories of smoking, and those who hadn't smoked but still got lung cancer. Smokers' cancers contained many more genetic mutations -- as many as 49, compared with just five in the tumors of nonsmokers.

The degree of genetic variation in the sample is no surprise. Cancer, scientists are learning, is not just one disease -- different genetic mutations can turn a cell rogue. That  undestanding is fueling the conviction that cancers, ideally, should be treated in a personalized way -- because the drug that works for one group of patients may not work well for another. Check out the article by Shari Roan on that topic in this week's Health section (a special on cancer).

-- Rosie Mestel

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Tami Dennis, who takes the word "skeptic" to previously uncharted territory, is the Times' Health and Science editor. She's adamant that pitches promoting awareness days, weeks or months are, by their nature, non-stories. And, because she's an adult, she refuses to use words like "veggies," "tummy" and "yummy."
Rosie Mestel, deputy Health and Science editor, studied genetics before abandoning flies, fungi and DNA for health/medical writing. Her hero is the biologist Ernst Haeckel, whose jellyfish paintings inspired snazzy chandeliers. Her favorite toast-spread is Marmite, a British delicacy made of yeast extract. Her least-favorite word is "millenniums."
Melissa Healy is a staff writer for the Health section reporting from Washington D.C. Healy's a veteran of The Times' National staff, having covered the Pentagon, Congress, poverty and social welfare, the environment, and the White House before shifting to Health in 2003. She writes frequently about mental health and human behavior, about federal health policy, prescription medication and ethics in medicine. More wonk than wellness freak, Healy chooses to believe in the health benefits of coffee and wine, and considers water a better work-out medium than beverage.
Karen Kaplan covers genetics, stem cells and cloning. She and colleague Thomas H. Maugh II comprise about 25% of the unofficial MIT-Alumni-in-Journalism Club, and she is proud to have taken more math (5) than English (0) courses in college. Her contributions to Booster Shots will, she hopes, appear more frequently than postings to her mommy blog.
Thomas H. Maugh II has been a science and medical writer at the Times for 23 years. Before that, he was on the staff of the journal Science for 13 years. He has bachelor's degrees in English and chemistry from MIT and a doctorate in chemistry from UC Santa Barbara.
After a brief stint as a sports writer, Shari Roan turned to health journalism and has covered the topic for The Times for 18 years. She is the author of three books and the mother of two daughters, both teenagers who refer to her as a "health freak." She likes to jog, watch baseball and is very happy that dark chocolate contains some health benefit.
Jeannine Stein writes about fitness, sports medicine and obesity for the Health section. She’s a gym rat from way back and never met an elliptical trainer she didn’t like. Well, maybe one or two. She tempers exercise with a steady diet of reality television because she believes it’s all about balance.